PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277458.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family HSF
Protein Properties Length: 313aa    MW: 34664 Da    PI: 4.373
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1131.9e-35281182101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k++++++d+++++lisw+++g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k ll++
  XP_021277458.1  28 FLTKTFQLVDDPSVDDLISWNDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFRRGEKGLLRD 113
                     9*****************************************************************99.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_021277458.1 114 IQRRK 118
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MAPLSADEPC ESPAGAASDS QRSLPTPFLT KTFQLVDDPS VDDLISWNDD GSTFIVWRPA  60
EFARDLLPKY FKHNNFSSFV RQLNTYGFRK VVPDRWEFAN DCFRRGEKGL LRDIQRRKIT  120
PAAAASATXD LAAVPCKVSP SNSDEQVISS NSPPVVTVVH RTTSCTTTPE LLEENERLRK  180
ENMQLNHELT QLKGLCNNIL TLMTNYASGQ LENPSNLAEG KALDLLPARN SAGTAEDGGS  240
KGAMAMEEEA DDVTPKLFGV SIGLKRVRRE EDDEEQNNNQ VLQQEIEPGS EVKAEPLDXE  300
TDDQETAWLE LGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.15e-83HSF family protein