PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021276806.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 477aa MW: 51804.6 Da PI: 7.3139

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021276806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.8	9e-32	249	304	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_021276806.1 249 KARRCWSPDLHRRFVNALQLLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 304 68****************************************************97 PP
2	Myb_DNA-binding	40.9	4.8e-13	251	302	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m +g+t ++ks++qky+ XP_021276806.1 251 RRCWSPDLHRRFVNALQLLGGSqvaTPKQIRELMKvEGLTNDEVKSHLQKYR 302 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MASPSELTLD CKPHSYSMLL KSFGDQQIDQ TQKLEEFLSR LEEERLKIDA FKRELPLCMQ 60 LLTNAVEASR QQLLACRSNH GSRPVLEEFM PLKNSNSDNS EKSQNISDKA NWMTTAQLWS 120 QAGNETKPQS SITSPKETEI GFSVSPKLAL DTKPRNGGAF LPFTKERNSC PGSALQALPD 180 LALASANKDM EDKKCPDTEN GMSCQRRENS GKVSNGGVVI EQGRGTGNTV DGQTTNTNPS 240 ANSTQPHRKA RRCWSPDLHR RFVNALQLLG GSQVATPKQI RELMKVEGLT NDEVKSHLQK 300 YRLHTRRPSP SPQAAGAPTP QLVVLGGIWV PPEYATAAAA AHSGAPTLYG THHPAAPHAP 360 PHFCASPVPQ EFYTAAAAAA TPAPPPPQLH HHAIHHQLHM YKANSQAHSS PESDVRGAGD 420 RSESIEDGKS ESSSWKGESG DNGGAGERKG LAALREEGEE SNDNLRRHNA NLDEARS

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MASPSELTLD CKPHSYSMLL KSFGDQQIDQ TQKLEEFLSR LEEERLKIDA FKRELPLCMQ  60
LLTNAVEASR QQLLACRSNH GSRPVLEEFM PLKNSNSDNS EKSQNISDKA NWMTTAQLWS  120
QAGNETKPQS SITSPKETEI GFSVSPKLAL DTKPRNGGAF LPFTKERNSC PGSALQALPD  180
LALASANKDM EDKKCPDTEN GMSCQRRENS GKVSNGGVVI EQGRGTGNTV DGQTTNTNPS  240
ANSTQPHRKA RRCWSPDLHR RFVNALQLLG GSQVATPKQI RELMKVEGLT NDEVKSHLQK  300
YRLHTRRPSP SPQAAGAPTP QLVVLGGIWV PPEYATAAAA AHSGAPTLYG THHPAAPHAP  360
PHFCASPVPQ EFYTAAAAAA TPAPPPPQLH HHAIHHQLHM YKANSQAHSS PESDVRGAGD  420
RSESIEDGKS ESSSWKGESG DNGGAGERKG LAALREEGEE SNDNLRRHNA NLDEARS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-115	G2-like family protein