PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 28960.6 Da PI: 8.7688 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.5 | 2.8e-28 | 98 | 157 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ k ++ pr+Y+rC+ a gCpvkkkv+r+ ed++++ tYeg+Hnh+ XP_021276785.1 98 VKDGFQWRKYGQKVTKYNPSPRAYFRCSVApGCPVKKKVQRCVEDNSFLLATYEGQHNHD 157 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MDAPNSNEKK VEALQAEVEH LKRANEALRL MLEAMSSKCN MLEAYLRESS SQPTGSVLTR 60 IGSCDEYLNK RPRPEVPAME KASQVFVKTD PRDKSLIVKD GFQWRKYGQK VTKYNPSPRA 120 YFRCSVAPGC PVKKKVQRCV EDNSFLLATY EGQHNHDVQS SPKQSLSSTE SSAVLSTTSS 180 PYPVLNNSFR PTITLDLTLS GSNVENSWNP RNLMQETSCN DHDNKRIEDY VASLTKDPNF 240 TVALAAAVAR SINGLRPSTP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 70 | 74 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 9e-46 | WRKY family protein |