PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021276768.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21775.2 Da PI: 4.5715 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kGVr +k +g+Wv+eIr p++ r r++lg+++ ae+Aa+a +aa +l+g XP_021276768.1 17 RFKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDNAEKAARAFDAALFCLRG 66 69****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MVKNISDRPA AERSDLRFKG VRKRKWGKWV SEIRLPNSRE RIWLGSYDNA EKAARAFDAA 60 LFCLRGRSAK FNFPDNPPDI AGGRSLTPPE IQAAAARFAQ TEPPRTHSEQ STSGFQTESS 120 SPSISEGTVQ LDSELPMDGS FLDLLTMGSN NYASDYGIFP GFDDLASDFL GSSVPNIGFE 180 EDNIDGILVP ESFLWNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 1e-59 | ERF family protein |