PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021276287.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Nin-like

Protein Properties

Length: 523aa MW: 58204.6 Da PI: 5.5324

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021276287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	22	3.3e-07	431	481	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGI...kRWPhRkik 50 k ++++dl+ +F++ kdAA+ L+++ TvL i + +RWP+R i+ XP_021276287.1 431 KMMTFNDLKPFFEMLRKDAARMLNLSETVLHNIFDEVTGkkgRRWPYREIT 481 789**************************998775431227***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MEPLLPDDDM NIFMGNMNHP FMDDTRNDFL NNLNPSLFGN PSSDNSDTGN LRVNSQSNPS 60 LNNLSTTTQM QQNFENEGLN NLHVPTRVNS TDQEPSQHPF ISSDLLPVQE PVLHPSSIPP 120 FTEQEATNPL QIATDWEGMH NEPNLENAQT SMRNEVNLEN SERGMHSEPN LENSQVETGL 180 GTQRLDKNKG KLSVGLSRPP PSGCSGCQML REITHRRGSL VKKLQLHGEL LRGRFFHALS 240 NVFDEDTTVV LDAENIDLYD KGYKDVEKFL SQYFIQQEQE GWSMYDDPRA VFFKVLCFGP 300 GGIPTGETAN TSNREKNPVP PTARVLASAP AEAANTSNRE RNPLPPTARV LATAPAEAAN 360 TSNRERNPVP PTARVLATAP AEAANRSNAE AANTSISQAG QVAATGSHEA TNPNNSGRRS 420 INLSEQRKRI KMMTFNDLKP FFEMLRKDAA RMLNLSETVL HNIFDEVTGK KGRRWPYREI 480 TANRRKIAKL TAIADSTDNP AARDRARDEI RTLEEQIDAL YRP

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MEPLLPDDDM NIFMGNMNHP FMDDTRNDFL NNLNPSLFGN PSSDNSDTGN LRVNSQSNPS  60
LNNLSTTTQM QQNFENEGLN NLHVPTRVNS TDQEPSQHPF ISSDLLPVQE PVLHPSSIPP  120
FTEQEATNPL QIATDWEGMH NEPNLENAQT SMRNEVNLEN SERGMHSEPN LENSQVETGL  180
GTQRLDKNKG KLSVGLSRPP PSGCSGCQML REITHRRGSL VKKLQLHGEL LRGRFFHALS  240
NVFDEDTTVV LDAENIDLYD KGYKDVEKFL SQYFIQQEQE GWSMYDDPRA VFFKVLCFGP  300
GGIPTGETAN TSNREKNPVP PTARVLASAP AEAANTSNRE RNPLPPTARV LATAPAEAAN  360
TSNRERNPVP PTARVLATAP AEAANRSNAE AANTSISQAG QVAATGSHEA TNPNNSGRRS  420
INLSEQRKRI KMMTFNDLKP FFEMLRKDAA RMLNLSETVL HNIFDEVTGK KGRRWPYREI  480
TANRRKIAKL TAIADSTDNP AARDRARDEI RTLEEQIDAL YRP