PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021276025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 309aa MW: 34453.6 Da PI: 6.5201 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 3e-30 | 153 | 211 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp++++ tYegeHnh XP_021276025.1 153 RDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSILVATYEGEHNHA 211 7***************************99****************************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence |
METAWVDTNL DLNIDIFNHR NKALKRESEG EVADSEVKVP LKQETGVLVE ELNRVSAENK 60 RLTEMLTVVC EHYNSLQNKF MELVSKNCEN EAATSKKRKA EFEDYTNMIG FSGNAESSCS 120 DEESSKRPKE SIKAEISRVY VRTNPSDHSL IVRDGYQWRK YGQKVTRDNP SPRAYFKCSF 180 APSCPVKKKV QRSAEDPSIL VATYEGEHNH AHSSPAELSL STSYNPDPRS APVSAPTKCS 240 APTVTLELMQ PGLMGDDTKR QVQQIDAPGI QQIVAQQMAA SLTRDPNFAA ALAAAISGRV 300 VEQTRLEKW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80840.1 | 1e-83 | WRKY family protein |