PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | YABBY | ||||||||
Protein Properties | Length: 184aa MW: 20814.6 Da PI: 8.0039 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 200.2 | 8.7e-62 | 6 | 157 | 4 | 170 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlks.nvekeesastsvs 97 + ++eq+Cy+ CnfCn +lavsvP + lf +vtvrCGhCt+l svn+a a q l+ ++ ++ + +++++++ +++++++ s++ XP_021275879.1 6 DVAPEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDV--------QAPNY--ATQDYRTeLGSSSKCNKLSMR 90 5689********************************************99999998884........11122..222222101222222222222 PP YABBY 98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + ++v++ v+rPPekrqrvPsayn+fikeeiqrika+nPdishreafs+aaknWahfP+ihfgl XP_021275879.1 91 A------PANNVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL 157 2......222333334589****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MSSCIDVAPE QLCYIPCNFC NIVLAVSVPC SNLFDIVTVR CGHCTNLWSV NMAAAFQSLS 60 WQDVQAPNYA TQDYRTELGS SSKCNKLSMR APANNVTEER VVNRPPEKRQ RVPSAYNQFI 120 KEEIQRIKAN NPDISHREAF STAAKNWAHF PHIHFGLMLE TNNQNKLDDA SEKHLMSRTA 180 LLNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 4e-91 | YABBY family protein |