PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021275339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WOX | ||||||||
Protein Properties | Length: 215aa MW: 24554.7 Da PI: 7.1951 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.4 | 1.8e-21 | 59 | 119 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_021275339.1 59 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 119 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 103.9 | 1.1e-33 | 58 | 121 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G+ tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq XP_021275339.1 58 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 121 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MSLVWRHLKF AHLWLQPWPF LFLFCHYLNG ILLVFQGGRL GNLYCDPLMT SAGHKITARQ 60 RWTPTPVQLQ ILERIFDQGT GTPSKQKIKE ITSELSQHGQ ISETNVYNWF QNRRARSKRK 120 QLVSSSNNAE SEVETEVESP NEKKTKPENL LSQQNPAPRA EDLCFQNPEI TSELHFLGVL 180 SNPNAYNGDD HLSGKMGMPG SYNIYDQAED YSMAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 121 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 3e-75 | WOX family protein |