PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021275082.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

CAMTA

Protein Properties

Length: 1088aa MW: 123318 Da PI: 6.4361

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021275082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.7	7e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL++++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e+n++fqr XP_021275082.1 20 MEAQHRWLRPAEICEILKDYKKFHIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEDNENFQR 114 5569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l++ivlvhy+evk XP_021275082.1 115 RSYWMLEEDLSHIVLVHYREVK 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MAETRRYGLS NQLDIEQILM EAQHRWLRPA EICEILKDYK KFHIAPEPAH MPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML 120 EEDLSHIVLV HYREVKGNRT NFNRIKETEE AIPYSQKTEG ILHNSEMESS MSSSFHPNDG 180 QIPSKTTDTT SLNSVQASEY EDAESGYNHQ ASSQFNSFLE LQQPVVGRID TGFSDPYVPL 240 SHSIDYHGKP SGTGFQLTQP DKSREYNDAG LTYEPQKNLD FTSWEDVLEN CTPGVESAQH 300 QPPFSSTQHD AMGQLFNNSF LTKQEFDDQT PVQEEWQASE GDSSHLSKWP LNQKLYPDLR 360 YDLTIRFHEQ EINHHVHPDK QHDNSMQNNQ QIEPSNGKHG YALKPDPESH LTIEGKSINS 420 SAMRQHLFDG FLAEEDLKKL DSFNRWMSKE LGDVDESHMQ SSSGAYWDAV EGQNGVDVST 480 IPSQGQLETF LLGPSLSQDQ LFSIIDFSPN WAYVGSEIKV LITGRFLKCR DEAENCKWSC 540 MFGEVEVPAE VIADGVLRCH TPIHKVGRVP FYVTCSNRLA CSEVREFEYR VNHIQDMDTM 600 DYPSTNANEI LGMRFGRLLC LSSRSLCSIT YSVADVSHLS NEINSLLKED IKEWDQMLMH 660 NSAEEFSPKK MKEQLLQKLL KEKLRVWLLQ KVAEGGKGPN ILDDGGQGVI HFAAALGYDW 720 ALEPTIVAGV SVNFRDVNGW TALHWAASYG RERTVASLIS LGAAPGALTD PTPKYPLGRT 780 PADLASTNGH KGISGYLAES DLSSHLQSLN LDNQGNNDTV DYRADAIQKI LESSTGPLSC 840 GDASDGPSLK DSLAAVRNAT QAAARIHQVF RVQSFQKRQL KEYGDGKFGM SNERALSLIA 900 VKANKPGQHD EHVQAAAIRI QNKFRGWKGR KEFLIIRQRI VKIQAHVRGH QVRKTYRKIV 960 WSVGILEKVI LRWRRKGSGL RGFKPEALTE GPSIRAPPSK EDDYDFLKEG RKQTEERLQK 1020 ALARVKSMAQ NPAGRDQYSR MKNVITEIQE TKVMYNKVLS STETVLDEDL IDLEKLLDAD 1080 TFMHTHLE

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MAETRRYGLS NQLDIEQILM EAQHRWLRPA EICEILKDYK KFHIAPEPAH MPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEDNE NFQRRSYWML  120
EEDLSHIVLV HYREVKGNRT NFNRIKETEE AIPYSQKTEG ILHNSEMESS MSSSFHPNDG  180
QIPSKTTDTT SLNSVQASEY EDAESGYNHQ ASSQFNSFLE LQQPVVGRID TGFSDPYVPL  240
SHSIDYHGKP SGTGFQLTQP DKSREYNDAG LTYEPQKNLD FTSWEDVLEN CTPGVESAQH  300
QPPFSSTQHD AMGQLFNNSF LTKQEFDDQT PVQEEWQASE GDSSHLSKWP LNQKLYPDLR  360
YDLTIRFHEQ EINHHVHPDK QHDNSMQNNQ QIEPSNGKHG YALKPDPESH LTIEGKSINS  420
SAMRQHLFDG FLAEEDLKKL DSFNRWMSKE LGDVDESHMQ SSSGAYWDAV EGQNGVDVST  480
IPSQGQLETF LLGPSLSQDQ LFSIIDFSPN WAYVGSEIKV LITGRFLKCR DEAENCKWSC  540
MFGEVEVPAE VIADGVLRCH TPIHKVGRVP FYVTCSNRLA CSEVREFEYR VNHIQDMDTM  600
DYPSTNANEI LGMRFGRLLC LSSRSLCSIT YSVADVSHLS NEINSLLKED IKEWDQMLMH  660
NSAEEFSPKK MKEQLLQKLL KEKLRVWLLQ KVAEGGKGPN ILDDGGQGVI HFAAALGYDW  720
ALEPTIVAGV SVNFRDVNGW TALHWAASYG RERTVASLIS LGAAPGALTD PTPKYPLGRT  780
PADLASTNGH KGISGYLAES DLSSHLQSLN LDNQGNNDTV DYRADAIQKI LESSTGPLSC  840
GDASDGPSLK DSLAAVRNAT QAAARIHQVF RVQSFQKRQL KEYGDGKFGM SNERALSLIA  900
VKANKPGQHD EHVQAAAIRI QNKFRGWKGR KEFLIIRQRI VKIQAHVRGH QVRKTYRKIV  960
WSVGILEKVI LRWRRKGSGL RGFKPEALTE GPSIRAPPSK EDDYDFLKEG RKQTEERLQK  1020
ALARVKSMAQ NPAGRDQYSR MKNVITEIQE TKVMYNKVLS STETVLDEDL IDLEKLLDAD  1080
TFMHTHLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein