PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274893.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 635aa MW: 68340.6 Da PI: 6.1115

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	362	420	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_021274893.1 362 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 420 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MAEGSGLSID LDPNSFFLHK PTVLNSFPEE TKDNNIVNNK NSKRSSKVFF PTTPLMDATT 60 ASRSSPPTIQ FPVNLNCSLD QHTSLPSDDH KRTVMGEMDF FAQKNNKLVD ADDDGDANPI 120 HTSDADVKGS TERTALELNV NTGLNLLTTN TSSDQSTVDD GISSNMEDKR AKRAKNELAV 180 LQAELERMME ENQRLRETLS QVTSNYNAVQ MHLVTLMQQQ HDGKAEKAEE QDPMMEEKSE 240 QKKPNGGVIV PRQFMDLGLA AAAAADADEP SLSSSEGRSH DRSGSPHNNT EVASKEFGLR 300 KSGNSEEGRG TGREDSPDQG SQGWGANKVP RFNSSKNVDQ TEATMRKARV SVRARSEAPM 360 ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDRTILI TTYEGNHNHP 420 LPPAAMAMAS TTSSAARMLL SGSMSSADGL MNSNFLTRTL LPCSSSMATI SASAPFPTVT 480 LDLTQTPSPL QFPRLPGQFQ VPFPNPPHNL ANSPAALLPQ IFGQALYNQS KFSGLQMSQD 540 MEQPQSGQQL PQGQQNSLAD TVSAATAAIA ADPNFTAALA AAITSIIGSS HPNNVPNNNA 600 TNFTSATNSS GNVTTTSNSN SNGNNKISNS SFAAN

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MAEGSGLSID LDPNSFFLHK PTVLNSFPEE TKDNNIVNNK NSKRSSKVFF PTTPLMDATT  60
ASRSSPPTIQ FPVNLNCSLD QHTSLPSDDH KRTVMGEMDF FAQKNNKLVD ADDDGDANPI  120
HTSDADVKGS TERTALELNV NTGLNLLTTN TSSDQSTVDD GISSNMEDKR AKRAKNELAV  180
LQAELERMME ENQRLRETLS QVTSNYNAVQ MHLVTLMQQQ HDGKAEKAEE QDPMMEEKSE  240
QKKPNGGVIV PRQFMDLGLA AAAAADADEP SLSSSEGRSH DRSGSPHNNT EVASKEFGLR  300
KSGNSEEGRG TGREDSPDQG SQGWGANKVP RFNSSKNVDQ TEATMRKARV SVRARSEAPM  360
ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ RCAEDRTILI TTYEGNHNHP  420
LPPAAMAMAS TTSSAARMLL SGSMSSADGL MNSNFLTRTL LPCSSSMATI SASAPFPTVT  480
LDLTQTPSPL QFPRLPGQFQ VPFPNPPHNL ANSPAALLPQ IFGQALYNQS KFSGLQMSQD  540
MEQPQSGQQL PQGQQNSLAD TVSAATAAIA ADPNFTAALA AAITSIIGSS HPNNVPNNNA  600
TNFTSATNSS GNVTTTSNSN SNGNNKISNS SFAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22070.1	1e-119	WRKY family protein