PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 211aa MW: 24465.7 Da PI: 6.7902 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.9 | 2.1e-19 | 55 | 109 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++++eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_021274505.1 55 KKRKLSQEQVNHLELNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 109 45699************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 117.2 | 9.4e-38 | 55 | 145 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkr+ls+eqv+ LE +F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+ ++ ++ +++rLe+ev +L+e+l XP_021274505.1 55 KKRKLSQEQVNHLELNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYNRLKTVHEGVVLDKCRLESEVLKLKEQLC 145 9***************************************************************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MTSSIQMNDL EDHMALISQM YPGVYTQISP HQGESKPRRR RKKNKGGENS LAGAKKRKLS 60 QEQVNHLELN FGNEHKLESE RKDRLASELG LDPRQVAVWF QNRRARWKNK KLEEEYNRLK 120 TVHEGVVLDK CRLESEVLKL KEQLCEAEKE IQRLTDRVDG VSSNSPSSSM SMEAMDPPFL 180 GEFGVEGYED VFCIPENSYI HGMEYWMNLC M |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 57 | RRRRKKNKGGENSLAGAKKR |
2 | 38 | 58 | RRRRKKNKGGENSLAGAKKRK |
3 | 39 | 58 | RRRRKKNKGGENSLAGAKKR |
4 | 39 | 59 | RRRRKKNKGGENSLAGAKKRK |
5 | 40 | 60 | RRRRKKNKGGENSLAGAKKRK |
6 | 41 | 61 | RRRRKKNKGGENSLAGAKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 7e-71 | HD-ZIP family protein |