PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274339.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NF-YB

Protein Properties

Length: 277aa MW: 31826.3 Da PI: 7.5655

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177.2	1.6e-55	100	195	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfe+yv+plk+yl+kyr++ege XP_021274339.1 100 KEQDRFLPIANVGRIMKKVIPSNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEEYVAPLKLYLSKYRDIEGE 194 89*******************************************************************************************99 PP NF-YB 97 k 97 k XP_021274339.1 195 K 195 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MQNLGFLFNC LLLCVSFHLL HPHKIPNHPF TKLETXLVSP KHCDCERYCY YYYRKEMEEE 60 SHGNVPHGPN KGSPESPCVK SSGSSNNNNQ NNNHPSNNSK EQDRFLPIAN VGRIMKKVIP 120 SNGKISKDAK ETVQECVSEF ISFVTGEASD KCQREKRKTI NGDDIIWAIT TLGFEEYVAP 180 LKLYLSKYRD IEGEKLNIPK QQRSEQKQQQ QQQQPQQQQS EHEHNLPYNS SVYSSTNLLS 240 RHPSFVPSDQ PFSLPFSSNS IQKQLQQQDQ IDSVGHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	2e-62	NF-YB family protein