PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 276aa MW: 30503.3 Da PI: 7.9211 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.4e-10 | 126 | 161 | 1 | 39 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKls 39 +r++h ++Er+RR+++N+ ++ L++++P + + ++ s XP_021274309.1 126 QRMTHIAVERNRRRQMNDYLAVLKSMMPAS---YVQRYS 161 79**************************97...333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MALEAVVFQQ DPFSFGSKDF YSSGGSGSGP CSYNFGFQQE EEKAYGTEET LAKSRGVDFS 60 ATWGSSPSLM VQHQPLKEWD SNSSSPDNGF LSCGFSPAEP PAGAMSCRRK RRRTKSVKNK 120 EDIENQRMTH IAVERNRRRQ MNDYLAVLKS MMPASYVQRY STGSTSTHRS CAAATSGQSM 180 AEKRSSSVAD VEVTMVESHA NLKILSKRHP KQLLKMVAGL HSLGLYVLHL NVTSVEHMVL 240 YSLSVKVEDN CQLTTVNEIA AAVYEMVDRF QEEAAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 109 | 113 | RKRRR |
2 | 109 | 114 | RKRRRT |
3 | 127 | 138 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 4e-50 | bHLH family protein |