PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274240.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family BES1
Protein Properties Length: 320aa    MW: 34373.4 Da    PI: 9.3295
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274240.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222236.4e-6931471149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqGnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  +e ag+s+++s +ss+q
  XP_021274240.1   3 GASGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKPP-PSELAGASTNISACSSIQ 96 
                     689*************************************************************************.****************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                      s++ss+++spv+sy+asp+ss  psp+++d +++   + llp+l++ ++++++
  XP_021274240.1  97 PSPQSSSFPSPVPSYHASPSSSLCPSPTRFDANPS---TYLLPFLRNIAAIPNN 147
                     *********************************88...5999999999888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MTGASGRLPT WKERENNKRR ERRRRAIAAK IYSGLRAQGN YKLPKHCDNN EVLKALCAEA  60
GWIVEEDGTT YRKGCKPPPS ELAGASTNIS ACSSIQPSPQ SSSFPSPVPS YHASPSSSLC  120
PSPTRFDANP STYLLPFLRN IAAIPNNLPP LRISNSAPVT PPLSSPTSRG SKPKADWESL  180
SNGSLNSCRH PLFATSAPSS PTRRHHKTPA TIPECDESDA STVDSGRWVS FQTVASTAAA  240
AVASPPSPTF NLVKRVVQQN PFRDGVTGHG GVTWGTVTEI GRGSEFAFEN GRVKPWEGER  300
IHEIGVDDLE LTLGTSKTCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-91BES1 family protein