PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021274130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 515aa    MW: 58175.2 Da    PI: 5.3318
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021274130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS318.21.7e-971154962372
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      + Lle A+a+++++  ++q+l++ l+el+sp+gd+ q+l ++f++AL +r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h+
  XP_021274130.1 115 XHILLETATAIADRNSGRVQQLMWMLNELSSPYGDTDQKLGSHFLQALFSRMTDSGERCYRTLASVSEKTCSFESTRKMVLKFQEVSPWTTFGHV 209
                     589************************************************************8888876665555555556************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg............skeeleetgerLakfAeelgvpfefn 179
                     ++N aI+ea+ege ++HiiD+ +++++QWp+Ll+aL   p   p+lR+T +  ++ g             ++ ++e+g+r++kfA+ +gvpf+fn
  XP_021274130.1 210 ACNGAIMEAFEGEXQLHIIDL-ATYCTQWPTLLEALLPAPMXNPHLRLTLCCXQNGGvsgaagagglaaVQKVMKEIGNRMEKFARLMGVPFKFN 303
                     *********************.68*************************99996665899999*****9999*********************** PP

            GRAS 180 vlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfd 269
                     v+++  +l dl+l+eL++k++Eala+n+v  lh++     +++++rd +++ +++l+P++++vve+ead++ +    +F+++f e+l+++ + f+
  XP_021274130.1 304 VIHHAgDLCDLDLSELNIKEDEALAINCVGTLHSIT----AVDNRRDIMISNFRRLQPRIITVVEEEADLDVGvdglEFVKGFQECLRWFRVYFE 394
                     **7777*****************************8....77888999*******************8885444555****************** PP

            GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgWk 363
                     +l+++++r+s+er ++Er+  gr+iv++vac+ +e++er+e++ +W++r++++GF+pv ls+++ +++++llr++k +g  + ++ ++ ++l W 
  XP_021274130.1 395 ALDESFARTSNERLMLERA-AGRAIVDLVACAPSESIERRESATRWSRRFHASGFSPVVLSDEVCDDVRALLRRYK-EGwSMAQCPDAGIFLSWX 487
                     *******************.********************************************************.66255568899999**** PP

            GRAS 364 drpLvsvSa 372
                     d+p+v++Sa
  XP_021274130.1 488 DQPVVWASA 496
                     ********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MDTLFRLVSL QSSDQSFNSS RTSSSSRSSR QNHHYQQEDE ECFNFFMDEE DFSSSFKHYY  60
PYHPSSHHPN PSTTTRLPQP PLRNILPTTH HAFDPSDFSL PASDLSFDFS GKWAXHILLE  120
TATAIADRNS GRVQQLMWML NELSSPYGDT DQKLGSHFLQ ALFSRMTDSG ERCYRTLASV  180
SEKTCSFEST RKMVLKFQEV SPWTTFGHVA CNGAIMEAFE GEXQLHIIDL ATYCTQWPTL  240
LEALLPAPMX NPHLRLTLCC XQNGGVSGAA GAGGLAAVQK VMKEIGNRME KFARLMGVPF  300
KFNVIHHAGD LCDLDLSELN IKEDEALAIN CVGTLHSITA VDNRRDIMIS NFRRLQPRII  360
TVVEEEADLD VGVDGLEFVK GFQECLRWFR VYFEALDESF ARTSNERLML ERAAGRAIVD  420
LVACAPSESI ERRESATRWS RRFHASGFSP VVLSDEVCDD VRALLRRYKE GWSMAQCPDA  480
GIFLSWXDQP VVWASAGGLD DGGRLFVHGE YYFWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein