PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 515aa MW: 58175.2 Da PI: 5.3318 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 318.2 | 1.7e-97 | 115 | 496 | 2 | 372 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 + Lle A+a+++++ ++q+l++ l+el+sp+gd+ q+l ++f++AL +r+++s++++y++l++ ++++ + +++ +++ f+evsP+ +f+h+ XP_021274130.1 115 XHILLETATAIADRNSGRVQQLMWMLNELSSPYGDTDQKLGSHFLQALFSRMTDSGERCYRTLASVSEKTCSFESTRKMVLKFQEVSPWTTFGHV 209 589************************************************************8888876665555555556************* PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg............skeeleetgerLakfAeelgvpfefn 179 ++N aI+ea+ege ++HiiD+ +++++QWp+Ll+aL p p+lR+T + ++ g ++ ++e+g+r++kfA+ +gvpf+fn XP_021274130.1 210 ACNGAIMEAFEGEXQLHIIDL-ATYCTQWPTLLEALLPAPMXNPHLRLTLCCXQNGGvsgaagagglaaVQKVMKEIGNRMEKFARLMGVPFKFN 303 *********************.68*************************99996665899999*****9999*********************** PP GRAS 180 vlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfd 269 v+++ +l dl+l+eL++k++Eala+n+v lh++ +++++rd +++ +++l+P++++vve+ead++ + +F+++f e+l+++ + f+ XP_021274130.1 304 VIHHAgDLCDLDLSELNIKEDEALAINCVGTLHSIT----AVDNRRDIMISNFRRLQPRIITVVEEEADLDVGvdglEFVKGFQECLRWFRVYFE 394 **7777*****************************8....77888999*******************8885444555****************** PP GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvlgWk 363 +l+++++r+s+er ++Er+ gr+iv++vac+ +e++er+e++ +W++r++++GF+pv ls+++ +++++llr++k +g + ++ ++ ++l W XP_021274130.1 395 ALDESFARTSNERLMLERA-AGRAIVDLVACAPSESIERRESATRWSRRFHASGFSPVVLSDEVCDDVRALLRRYK-EGwSMAQCPDAGIFLSWX 487 *******************.********************************************************.66255568899999**** PP GRAS 364 drpLvsvSa 372 d+p+v++Sa XP_021274130.1 488 DQPVVWASA 496 ********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence |
MDTLFRLVSL QSSDQSFNSS RTSSSSRSSR QNHHYQQEDE ECFNFFMDEE DFSSSFKHYY 60 PYHPSSHHPN PSTTTRLPQP PLRNILPTTH HAFDPSDFSL PASDLSFDFS GKWAXHILLE 120 TATAIADRNS GRVQQLMWML NELSSPYGDT DQKLGSHFLQ ALFSRMTDSG ERCYRTLASV 180 SEKTCSFEST RKMVLKFQEV SPWTTFGHVA CNGAIMEAFE GEXQLHIIDL ATYCTQWPTL 240 LEALLPAPMX NPHLRLTLCC XQNGGVSGAA GAGGLAAVQK VMKEIGNRME KFARLMGVPF 300 KFNVIHHAGD LCDLDLSELN IKEDEALAIN CVGTLHSITA VDNRRDIMIS NFRRLQPRII 360 TVVEEEADLD VGVDGLEFVK GFQECLRWFR VYFEALDESF ARTSNERLML ERAAGRAIVD 420 LVACAPSESI ERRESATRWS RRFHASGFSP VVLSDEVCDD VRALLRRYKE GWSMAQCPDA 480 GIFLSWXDQP VVWASAGGLD DGGRLFVHGE YYFWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 0.0 | GRAS family protein |