PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021274064.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | DBB | ||||||||
Protein Properties | Length: 185aa MW: 20258.9 Da PI: 6.4917 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.6 | 2.2e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ fC ++ lC+ C ++ H XP_021274064.1 4 LCDSCESAAAIVFCAADEAALCRACDEKVH 33 7**************************998 PP | |||||||
2 | zf-B_box | 25.4 | 2.9e-08 | 52 | 86 | 2 | 36 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ +e+ ++ ++Ce +++ lC +C + H g XP_021274064.1 52 DVPLCDICENAPAFFYCEIDGSSLCLQCDMIVHVG 86 5689**************************99955 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MRTLCDSCES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLANP SDVPLCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HARYLIFRQR VEFPGDKPGN VEDPASQPVD 120 PGETRRGQNQ PAKPTVGESQ QNHKVSSVQV VDANADGHVK MDTKMIDLNM KPHRIHGQAS 180 NNQEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-77 | DBB family protein |