PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021274063.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

DBB

Protein Properties

Length: 190aa MW: 20855.7 Da PI: 6.6907

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021274063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.3e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ fC ++ lC+ C ++ H XP_021274063.1 4 LCDSCESAAAIVFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	25.3	3.1e-08	52	86	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ +e+ ++ ++Ce +++ lC +C + H g XP_021274063.1 52 DVPLCDICENAPAFFYCEIDGSSLCLQCDMIVHVG 86 5689**************************99955 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MRTLCDSCES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLANP SDVPLCDICE 60 NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HARYLIFRQR VEFPGDKPGN VEDPASQPVD 120 PGETRRGQNQ PAKPTVGESQ QNHKVSSVQV VDANADGHVK MDTKMIDLNM KPHRIHGQAS 180 NNQMLVSFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-77	DBB family protein