PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN27168.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NF-YA
Protein Properties Length: 290aa    MW: 32219.6 Da    PI: 9.7123
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN27168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.41.8e-31144200158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq Ra++e ekk   k+rkpylheSRh+hA+rR+RgsgGrF
  PIN27168.1 144 EEPVYVNAKQYHGILRRRQIRARAELEKKS-VKNRKPYLHESRHQHAMRRARGSGGRF 200
                 69**************************99.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MPTIAKSNGR QLETGLRSIQ TSTPYSQPWW QGLGNNDMAS SGRQGDGSMT PATLQPQAAN  60
EAIVKHTETN AALQPALNGN SNGQEQQHLD ANSQMELVGH SIMLTSYPYA DPQYGGMLTY  120
GASVHPHLLG YHPARMPLPL EMEEEPVYVN AKQYHGILRR RQIRARAELE KKSVKNRKPY  180
LHESRHQHAM RRARGSGGRF LNTKKLDANA NNCASGEQAK SAETSNSNST ANQREDDAST  240
FQETRKEHIL SNGFSNGHGL ALYYRQSTTR DEDNWNPLVN RAPQRPSSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.24e-34NF-YA family protein