PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 223aa MW: 25814.4 Da PI: 8.7175 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.6 | 4.7e-32 | 146 | 204 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PIN26880.1 146 LDDGYKWRKYGQKVVKDTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 204 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MSSASESMIN QSLLEDQEMF GIFPFHTNFT PLPLGCNNQP FKTLANINPS SLTPDLPLSL 60 FDHHHSLAPK QKELDFPAHF PGSQILSLQK STPNYWAFGD LSDCMNMKRS GDHLGVSPMK 120 MKKIKARRKM REPRFCFKTM SDVDVLDDGY KWRKYGQKVV KDTLHPRSYY RCTQDNCRVK 180 KRVERLAEDP RMVITTYEGR HIHSPSHDDE DSQASAQLNN FFW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39410.1 | 9e-51 | WRKY family protein |