PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26803.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C3H
Protein Properties Length: 432aa    MW: 47315.5 Da    PI: 7.7993
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.52.3e-08108128425
                 ---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                 +lC+++ + G Ck+Gd+Ck+ H
  PIN26803.1 108 KLCNHWVQ-GSCKFGDNCKYLH 128
                 69******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MDMDGGRRVF NRLGPSSSTD NTNKQQKVCF HWRQGKCTRY PCPFLHSELP TAANGKRPHQ  60
GFGAEDNYRA GGGLRRSGNY NFSNNNTWGR VQPQQPVNNR TVVKRIEKLC NHWVQGSCKF  120
GDNCKYLHQW STGDCFSLLA PLDGHQQVVT GITLPMGSDK LYTGSQDETV RVWDCQSGQL  180
VGVVNVGGAV GCMLSEGPWV FVGLANLVKA WNIQTSAELS LNGPVGQVYS LVVGSDLLFA  240
GTQEGAILAW KFNVAANCFE PAASLKGHTL AVVTLVVGGN RMYSGSMDQS IRVWSLETLQ  300
CIQTLSSHTD VVMSVLCWDQ FLLSASLDKT VKVWAATESG NLEVTYTHTE EHGLLTLCGM  360
HDSEAKPVLF CSLNDNSIRV YDLPSFTERG KIYSKKEVRS IQIGPGGLFF TGDGSGQVRV  420
WKWSAEPSTA LS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein