PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN26774.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 309aa MW: 34371 Da PI: 6.7113

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN26774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.4e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++++G g+W++ ++ g++R++k+c++rw +yl PIN26774.1 15 KGPWTPEEDDKLIKYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	54.8	2.2e-17	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE++ ++++++ lG++ W++Ia +++ gRt++++k++w++ PIN26774.1 68 RGKFSQEEEQTILNLHAILGNK-WSAIATHLP-GRTDNEIKNFWNT 111 89******************.*****.*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGRSPCCDEN TGLKKGPWTP EEDDKLIKYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSQEEEQTIL NLHAILGNKW SAIATHLPGR TDNEIKNFWN TQLKKKLIQM 120 GFDPMTHRPR TDIFSSLPHL LALANLKELI ENPSWEEQAM RLQTEAVQMA RLNQYLQYIL 180 QPPAPAINPD MAALSLFNSL KEGSVLSQLE TPPAPPSFSA GGGSYLQDSV PFSHLPDLQT 240 INQSCSSKEE APMVQGSPWM QPSPPSPAAP VPVTENSLSN TGDACSTSSY GGTQMWSELL 300 DDPLFHEIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-101	MYB family protein