PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN26755.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 318aa    MW: 35285.4 Da    PI: 6.2608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN26755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.72e-20131181256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ kl+ge
  PIN26755.1 131 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDKAAYKLRGE 181
                 59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAAAIDIYSS SDPFREELMR ALQPFMKSAS SSPNPFSPSS SSSSSSSFSS EPNMYTDFSS  60
IPSRSHVFSP GYSSFDDQNV TIELNQLSPS QILQIQAQIQ FQQQELQQSY KSSSFLGPKP  120
VPMKQQKPTK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT FETAEEAALA YDKAAYKLRG  180
EFARLNFPHL KHKLCQESSD FKPLHSSVDA KLQAICQSLA NSQKQGNPGN PKSEISTGGG  240
VSPKQESESP NELLNLGLKG HETVKMEASI SSPSPSDELS SSPESGISFL DFSEPLFDES  300
ENFTLQKFPS VEIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.16e-52ERF family protein