PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN26577.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 21719.9 Da PI: 4.6568 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.5e-15 | 35 | 84 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r ++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa a++ a + l+g PIN26577.1 35 PVYRGIR-CR-SGKWVSEIREPRK---STRIWLGTYPTPEMAAVAYDVASLTLRG 84 68****9.55.6*********843...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MASDGKHDSS SNPLTITPTL EENTPIPSPT SGRHPVYRGI RCRSGKWVSE IREPRKSTRI 60 WLGTYPTPEM AAVAYDVASL TLRGSEAKMN FPDLAQSYPV PASHSAGDIR GAAAAAAATV 120 ASPRSGSGDQ NQAAPPGNGS SSSVHTGGQE FVDEEELFDM PKLLEDMAEG MLVSPPRLKP 180 AADDEESPDN YSRNDSLWNY PSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 8e-48 | ERF family protein |