PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25837.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Nin-like

Protein Properties

Length: 957aa MW: 105697 Da PI: 6.0481

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.1e-29	585	636	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ PIN25837.1 585 AEKTISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 636 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MKMPSEPEEE TSRQPAQPPS SAPEVLMDLD LDLDGSWPLD QIFAAAASNP SSPFLLTNTE 60 QPCSPLWAFS DENNHGNFVA GASFRLSDSS RIFPYAHPDM PTENALGDDD KRKLPSPFMG 120 LMPIDNLDGS CIIKERMTQA LRYFKDLTEQ HVLAQVWAPV KNGGRYMLTT SGQPFVLDPN 180 SNGLHQYRLV SLTYMFSVDG DTDLGLPGRV FRQKLPEWTP NVQYYSSKEF PRLNHALHYN 240 VRGTLALPVF EPSGQSCVGV LELIMTSQKI NYAPEVDKVC KALEAVNLKS SEILDYQSTQ 300 ICNEGRQNAL AEILEIITVV CETHTLPLAQ TWVPCRHRSV LANGGGFKKT CSSFDGSCMG 360 QVCMSTTDVA FYVVDAHMWG FREACAEHHL QKGQGVAGRA FASHNSCFCQ DITEFSKTEY 420 PLVHYARMFR LRSSFAICLR SNHTGNDDYV LEFFLPLNIK SYEEQQTLLD SLLVTMKQHF 480 GSLRVASGRD LDDEWRSIEI IKASMDEKFN MRPADFVATS PPRPPSLSNG KTVHHDAFER 540 QAVVGEVNAA NVKGSTGSPT EVQNGASAAE AKDTGKKPER KRGKAEKTIS LEVLQQYFAG 600 SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL SKLKRVIESV QGGEGTFNLT 660 SLATSSIPVT EEKKEVAITK APGADEPVEA SNHNLDKFTP RGASVLPGEG SYRSRTGSGS 720 REESTGTPTS QGSCQGSPCL RNETSPQNDP VVSPIDEHRM KMRGSHEHAC QQVGEINLSA 780 AFPIPANFIT APEEPFGGML VEDAGSSHDL RNLCPAGEAL FDEHVTEYSW TKQPCPDTRP 840 KDCVAAPADH RTRFAARPEV KTITIKATYR EDIIRFRLPT ESGIIMLKEE VAKRLKLELG 900 TFDIKYLDDD HEWVLIACDA DLQECIDISR SSGSNIIRLL VHDIMANLGS SCESSGE

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MKMPSEPEEE TSRQPAQPPS SAPEVLMDLD LDLDGSWPLD QIFAAAASNP SSPFLLTNTE  60
QPCSPLWAFS DENNHGNFVA GASFRLSDSS RIFPYAHPDM PTENALGDDD KRKLPSPFMG  120
LMPIDNLDGS CIIKERMTQA LRYFKDLTEQ HVLAQVWAPV KNGGRYMLTT SGQPFVLDPN  180
SNGLHQYRLV SLTYMFSVDG DTDLGLPGRV FRQKLPEWTP NVQYYSSKEF PRLNHALHYN  240
VRGTLALPVF EPSGQSCVGV LELIMTSQKI NYAPEVDKVC KALEAVNLKS SEILDYQSTQ  300
ICNEGRQNAL AEILEIITVV CETHTLPLAQ TWVPCRHRSV LANGGGFKKT CSSFDGSCMG  360
QVCMSTTDVA FYVVDAHMWG FREACAEHHL QKGQGVAGRA FASHNSCFCQ DITEFSKTEY  420
PLVHYARMFR LRSSFAICLR SNHTGNDDYV LEFFLPLNIK SYEEQQTLLD SLLVTMKQHF  480
GSLRVASGRD LDDEWRSIEI IKASMDEKFN MRPADFVATS PPRPPSLSNG KTVHHDAFER  540
QAVVGEVNAA NVKGSTGSPT EVQNGASAAE AKDTGKKPER KRGKAEKTIS LEVLQQYFAG  600
SLKDAAKSLG VCPTTMKRIC RQHGISRWPS RKINKVNRSL SKLKRVIESV QGGEGTFNLT  660
SLATSSIPVT EEKKEVAITK APGADEPVEA SNHNLDKFTP RGASVLPGEG SYRSRTGSGS  720
REESTGTPTS QGSCQGSPCL RNETSPQNDP VVSPIDEHRM KMRGSHEHAC QQVGEINLSA  780
AFPIPANFIT APEEPFGGML VEDAGSSHDL RNLCPAGEAL FDEHVTEYSW TKQPCPDTRP  840
KDCVAAPADH RTRFAARPEV KTITIKATYR EDIIRFRLPT ESGIIMLKEE VAKRLKLELG  900
TFDIKYLDDD HEWVLIACDA DLQECIDISR SSGSNIIRLL VHDIMANLGS SCESSGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein