PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25479.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 431aa    MW: 48392.7 Da    PI: 5.9458
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS203.31.5e-621454283297
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                   Ll+cAe v+ ++  la +lL +  +++sp g+++qRla+yf +AL +++ + ++       +s    +  +   + l + ++  P+ +++ ++  q+
  PIN25479.1 145 VNLLSCAEKVDYEQYDLAGKLLDECYKMSSPIGSTIQRLAFYFIQALYEKVGSVTPMGL----CSYP-LEALIWPSMLLLAIHKGYPLSQITKFAGIQT 238
                 579*************************************************9333222....2222.233556666666789999************* PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 Il+ v +++++H+iD++i  G+++  L+qaL +R++ p  +lRiT++g    +ske +eetg+rL +fAe+l+++f+f+v+++ ++  l+ + ++v pg
  PIN25479.1 239 ILDHVVEARKIHVIDLEIRSGIHYTILIQALVDRSKHPVeHLRITALGT---KSKEIMEETGKRLMSFAESLKLSFSFDVVMVADILGLKESLFKVVPG 334
                 ***********************************66655*********...689******************************************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 E++aV+ +++l+ l+ +      + +++++++k+l+P +++++e ea+ ns++F  rf+e+l +y a+fds+++ + +++ +r+  E+ +lg +i+nv
  PIN25479.1 335 ETVAVHAAYALMGLVGRVD----RLEHIMRVIKDLNPCIMIIAEMEANFNSPTFIGRFVESLFFYGAFFDSFAECMKNDETNRREFEATCLGSSIRNV 428
                 **************93333....3667**********************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MPVNTENGND KFISQETSSH GVEELESFAT FCNLDDLYLD VVSPSFQSFD DQIISVKPSN  60
AKEDYSASFH ILRKHKRKYP KLDENKAIVS SQNSVIPTLS TEAIIELAAE NFIQSASKSS  120
KKLSLFNHLY SSSFLSLSKD FQLIVNLLSC AEKVDYEQYD LAGKLLDECY KMSSPIGSTI  180
QRLAFYFIQA LYEKVGSVTP MGLCSYPLEA LIWPSMLLLA IHKGYPLSQI TKFAGIQTIL  240
DHVVEARKIH VIDLEIRSGI HYTILIQALV DRSKHPVEHL RITALGTKSK EIMEETGKRL  300
MSFAESLKLS FSFDVVMVAD ILGLKESLFK VVPGETVAVH AAYALMGLVG RVDRLEHIMR  360
VIKDLNPCIM IIAEMEANFN SPTFIGRFVE SLFFYGAFFD SFAECMKNDE TNRREFEATC  420
LGSSIRNVFS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.18e-34GRAS family protein