PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN25399.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 22723.3 Da PI: 5.9505 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.6 | 4.2e-15 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ g+Wv+e+r+p +k++r++lg+f +e Aa a++ a+++l+g PIN25399.1 34 IYRGVRQKN-GGKWVCEVREP---NKKTRIWLGTFPNPETAAVAHDVAALALRG 83 69****765.9******9998...347*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MDFEDNQSSS SSSPPHNHKK RAGRKIFKET RHPIYRGVRQ KNGGKWVCEV REPNKKTRIW 60 LGTFPNPETA AVAHDVAALA LRGDNAPLNF PDSAASLPRP QSSSQKDIQR AAFQAARDFR 120 LVSGSSGQTR VSDVELVTCN HGPGDCESGN NALEGYVDEE EVFNMPVLLD SMAEGMLLTP 180 LAMKKGFNWS DHEDDDGIEI MALWGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 4e-43 | ERF family protein |