PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25314.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 751aa    MW: 84238.7 Da    PI: 4.8873
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS364.91.1e-1113777481373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++ L++cA+ v+++d + a + L+++++++sp+gd+ qRla++f+ +L+arl ++++ely++l+ ++ +    +e+l+a++++  ++P+ k+s + aN
  PIN25314.1 377 LRTILISCAQSVAADDRRTAYEQLKQIRQHSSPTGDAYQRLATVFACGLEARLGGTGTELYASLTQRKIT---AAEKLKAYQVYLSACPFKKLSIFFAN 472
                 5789*********************************************************999999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I   +++++ +HiiDf+i +G+QWp L+q+L++Rp+gpp+lRiTg++ p++g   +e++eetg rLak++e++gvpfe+++++++++e +++e+L++
  PIN25314.1 473 KMIGLVASEATSLHIIDFGILYGFQWPILIQQLSQRPGGPPKLRITGIELPQPGfrPAERVEETGCRLAKYCERFGVPFEYQAIAMQNWERIKMEDLKI 571
                 *****************************************************9********************************************* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  +gE+laVn+ ++  rllde+v ++s+rd vL+l+++++P+++v +  + +++++ F++rf eal +ysalfd+l+++lpr++ +r++ E+ + g e+ 
  PIN25314.1 572 VRGEVLAVNCLFRFGRLLDETVVVDSPRDVVLNLIRKMKPDIFVNAVTNGSYSAPFFVTRFREALFHYSALFDMLDSTLPRDNPQRMNFEQDFYGHEAI 670
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+acegaer+er et+++W+ r ++aGFkp+pl+++++k+ ++ +++ + + +  +e+  ++++gWk+r + + S+W
  PIN25314.1 671 NVIACEGAERVERPETYKQWQVRHMRAGFKPLPLNQEVMKKLRHKISTGYHKDFLFDEDGSWMLQGWKGRIICASSCW 748
                 ***********************************************999888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 751 aa     Download sequence    
MDPPFSEIPN AANGFKFDDD NFLPSYGHSQ NLPSGIKHDY LDLDAWDIPI IPPSPSPDNF  60
APSSTVSYET ESPDDQDSDP VLKFLNQILV EENMEEKPSM FHDPLALRAT EKSLYEVIGE  120
KYPPSPYHPI NYGEQKSDSP ESFFGSSSEY TNSSNAGSSS IDPQWIVDPG EYNSSVEQGH  180
LQDLPSNSFL GGDSQLPFGT VNNSYSNANT QMTSFGNTSM LQNVFSDSES ILQFKRGMEE  240
ASKFLPTTNK LFIDLDKYDL PQKSEDITPP IAVKAEKDEI DDSSNGLKGR KHHYPEDGDP  300
NDVERSSKQS AIYVEDVELS EMFDKVLLCD VKECGSGDAK LQNGVEKASV QPVLLNGSNG  360
GRARARKNEG KGDSVDLRTI LISCAQSVAA DDRRTAYEQL KQIRQHSSPT GDAYQRLATV  420
FACGLEARLG GTGTELYASL TQRKITAAEK LKAYQVYLSA CPFKKLSIFF ANKMIGLVAS  480
EATSLHIIDF GILYGFQWPI LIQQLSQRPG GPPKLRITGI ELPQPGFRPA ERVEETGCRL  540
AKYCERFGVP FEYQAIAMQN WERIKMEDLK IVRGEVLAVN CLFRFGRLLD ETVVVDSPRD  600
VVLNLIRKMK PDIFVNAVTN GSYSAPFFVT RFREALFHYS ALFDMLDSTL PRDNPQRMNF  660
EQDFYGHEAI NVIACEGAER VERPETYKQW QVRHMRAGFK PLPLNQEVMK KLRHKISTGY  720
HKDFLFDEDG SWMLQGWKGR IICASSCWVP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein