PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25289.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 531aa MW: 58778.1 Da PI: 4.3141

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	97.3	2.2e-30	4	80	51	128
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k+++++w+fFs+rd+ky++g r+nr k+gyWkatgkd+ + + ++++vg+kktLvfy+grap+g +tdWvmhey++ PIN25289.1 4 LKTGDRQWFFFSPRDRKYPNGARSNRGSKHGYWKATGKDRVISC-GSRAVGIKKTLVFYRGRAPSGDRTDWVMHEYTM 80 567899******************99***********9.99***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MSKLKTGDRQ WFFFSPRDRK YPNGARSNRG SKHGYWKATG KDRVISCGSR AVGIKKTLVF 60 YRGRAPSGDR TDWVMHEYTM DEEELKRCQT AKEYYALYKV YKKSGPGPKN GEQYGAPFRE 120 EDWADDELEV QCLVERENPV KGVNEVTPID NSKMVTFQYQ SSQDDLEEFL NQIVDEPIPI 180 PPLVVDHGYA PDQVAHEQEA RSALVDHSSW DVSSPVLQPF GQQPNLTASF DLTQSGTGQL 240 QLCEAPNISS ALAIHTQDPC ITEEDFLEDF LEMNDLLGAE LAVQNPDEPG NNLENLRFDD 300 FDGLHEFDLY QDASTFLCEV EPDESGQISG PCMNSLDNGF MSQISSTYLE NLENVTVNHQ 360 LLQQCNNANG ISYLMRTDEP SCTVVTATEA NQESVRSSTF MSGAVQQIQN HDFVVNHLAG 420 ANENGSGQQE DDGTDSWFSS ALWSFVESIP TTPASASEIA LANCAFEGMS SLSRVRINTR 480 SMNVAAGNAS ATSRNLGKSR TGFLCCSLLG VLCAVLWVLI GTSARVMGLY I

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MSKLKTGDRQ WFFFSPRDRK YPNGARSNRG SKHGYWKATG KDRVISCGSR AVGIKKTLVF  60
YRGRAPSGDR TDWVMHEYTM DEEELKRCQT AKEYYALYKV YKKSGPGPKN GEQYGAPFRE  120
EDWADDELEV QCLVERENPV KGVNEVTPID NSKMVTFQYQ SSQDDLEEFL NQIVDEPIPI  180
PPLVVDHGYA PDQVAHEQEA RSALVDHSSW DVSSPVLQPF GQQPNLTASF DLTQSGTGQL  240
QLCEAPNISS ALAIHTQDPC ITEEDFLEDF LEMNDLLGAE LAVQNPDEPG NNLENLRFDD  300
FDGLHEFDLY QDASTFLCEV EPDESGQISG PCMNSLDNGF MSQISSTYLE NLENVTVNHQ  360
LLQQCNNANG ISYLMRTDEP SCTVVTATEA NQESVRSSTF MSGAVQQIQN HDFVVNHLAG  420
ANENGSGQQE DDGTDSWFSS ALWSFVESIP TTPASASEIA LANCAFEGMS SLSRVRINTR  480
SMNVAAGNAS ATSRNLGKSR TGFLCCSLLG VLCAVLWVLI GTSARVMGLY I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-107	NAC family protein