PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25288.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 581aa MW: 65163.4 Da PI: 4.4937

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.7	8.2e-52	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppGfrFhPtdeelv +yLk+k+ k++++ +vi e+d+yk+eP++Lp +k+k+++++w+fFs+rd+ky++g r+nr t++gyWkatgkd+ + + +++ PIN25288.1 15 PPGFRFHPTDEELVLYYLKRKICCKRHRI-DVIGETDVYKWEPEELPgiSKLKTGDRQWFFFSPRDRKYPNGARANRGTRHGYWKATGKDRVISC-GSR 111 9***********************999.99***********6559999*************************************9.99 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kktLvfy+grap+ge+tdWvmhey++ PIN25288.1 112 AVGIKKTLVFYRGRAPRGERTDWVMHEYTM 141 ****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MKVDADSFGN GDIFPPGFRF HPTDEELVLY YLKRKICCKR HRIDVIGETD VYKWEPEELP 60 GISKLKTGDR QWFFFSPRDR KYPNGARANR GTRHGYWKAT GKDRVISCGS RAVGIKKTLV 120 FYRGRAPRGE RTDWVMHEYT MDEEELKRCQ TAKEYYALYK VYKKSGPGPK NGEHYGAPFR 180 EEDWLDDELG VKCLPEQENP VKEGNEITTM DRTICEDQSS LDDLEEFLNQ IVDEHSPIQP 240 LVVDYGYSLD QVAGGEETQS TVVDHFSRDV SLPVTQPFSQ KPNAPASFDL TQSGTTQVQL 300 CEAPEVSSAT MSNVQDPRFT EEDFLEDFLE MDDLLGPDPT TQDPDKPVNN FEKVQFDEFA 360 GLNEFDLYQD ASSSLCPVAP VESRQISQPY MNNLDNGVVN PLSSSLMNNL ENTSANYLLQ 420 QQFNNDGISY ETWTDEQIYN GVNSAEANHG FIPASTSGVL HENQNNGFVN HSAGMIANGS 480 SKQDDGTDSW FSSALWSFVE SIPTTPASAS ESALVNRAFE RMSSFSRLRI NARNMNVAAG 540 NASATSRTVG IFRTSFIILS LLGVMCAIIW MLIGNSVRVM G

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MKVDADSFGN GDIFPPGFRF HPTDEELVLY YLKRKICCKR HRIDVIGETD VYKWEPEELP  60
GISKLKTGDR QWFFFSPRDR KYPNGARANR GTRHGYWKAT GKDRVISCGS RAVGIKKTLV  120
FYRGRAPRGE RTDWVMHEYT MDEEELKRCQ TAKEYYALYK VYKKSGPGPK NGEHYGAPFR  180
EEDWLDDELG VKCLPEQENP VKEGNEITTM DRTICEDQSS LDDLEEFLNQ IVDEHSPIQP  240
LVVDYGYSLD QVAGGEETQS TVVDHFSRDV SLPVTQPFSQ KPNAPASFDL TQSGTTQVQL  300
CEAPEVSSAT MSNVQDPRFT EEDFLEDFLE MDDLLGPDPT TQDPDKPVNN FEKVQFDEFA  360
GLNEFDLYQD ASSSLCPVAP VESRQISQPY MNNLDNGVVN PLSSSLMNNL ENTSANYLLQ  420
QQFNNDGISY ETWTDEQIYN GVNSAEANHG FIPASTSGVL HENQNNGFVN HSAGMIANGS  480
SKQDDGTDSW FSSALWSFVE SIPTTPASAS ESALVNRAFE RMSSFSRLRI NARNMNVAAG  540
NASATSRTVG IFRTSFIILS LLGVMCAIIW MLIGNSVRVM G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-137	NAC family protein