PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN25216.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

E2F/DP

Protein Properties

Length: 501aa MW: 55703.4 Da PI: 4.6294

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN25216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	48.4	1.6e-15	199	229	39	71
E2F_TDP 39 vknkrRRiYDilNVLealnliekkekneirwkg 71 v ++RRiYDi+NVLe+++liekk kn+i+wkg PIN25216.1 199 V--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 229 4..9***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MQPQQPSQQQ SSRKQLPFTS MKPPFGGGSS GDYHHFATAD THRSNQEFDE AIVVKTPPVL 60 GLGQNEVACI YLYDLVAGPS DEGFSEMKLK YQLLVIFWFW KKPLKRKTGI ADCEAESAEQ 120 HAGPGRVAGA KGPLRTPPSG KSGKAQKVPR TTKANKAGSQ MPVANIGSPG GNNLTPVGPC 180 RYDSSLDYVK NLTFLSYPVQ KRRIYDITNV LEGIGLIEKK LKNRIQWKGV DVSRPGEVDE 240 SLSSLQEEVE NLIMDERRLD ERIREMQEKL RGLSEDENNQ KWLFVTEEDI KTLPCFQNET 300 LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI VLRSTMGPID VYLVSQFEEN FEEINAVEAQ 360 PSIPEPSTAN ENSFARSPQE IGGNEIDVQV IESQRMCTET STSQDFVSGI MKIVPDVDSD 420 ADYWLLSDAD ISITDMWRME SGVDWNSLDT IHEDYTITGI STPRAQTPPP NATTMPSIEP 480 QAQTTPSSTT TVPSVTNTTR S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MQPQQPSQQQ SSRKQLPFTS MKPPFGGGSS GDYHHFATAD THRSNQEFDE AIVVKTPPVL  60
GLGQNEVACI YLYDLVAGPS DEGFSEMKLK YQLLVIFWFW KKPLKRKTGI ADCEAESAEQ  120
HAGPGRVAGA KGPLRTPPSG KSGKAQKVPR TTKANKAGSQ MPVANIGSPG GNNLTPVGPC  180
RYDSSLDYVK NLTFLSYPVQ KRRIYDITNV LEGIGLIEKK LKNRIQWKGV DVSRPGEVDE  240
SLSSLQEEVE NLIMDERRLD ERIREMQEKL RGLSEDENNQ KWLFVTEEDI KTLPCFQNET  300
LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI VLRSTMGPID VYLVSQFEEN FEEINAVEAQ  360
PSIPEPSTAN ENSFARSPQE IGGNEIDVQV IESQRMCTET STSQDFVSGI MKIVPDVDSD  420
ADYWLLSDAD ISITDMWRME SGVDWNSLDT IHEDYTITGI STPRAQTPPP NATTMPSIEP  480
QAQTTPSSTT TVPSVTNTTR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-120	E2F/DP family protein