PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN25047.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 295aa    MW: 33382.2 Da    PI: 7.4311
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN25047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-092570346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +++ +a +++ ++   +W  +a++++ g+t  +++  ++ 
       PIN25047.1 25 KWTPEENKKFENALALFDKDtpdRWQNVASMIP-GKTVSDVIKQYRE 70
                     8********************************.*******999986 PP
2Myb_DNA-binding46.21.1e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
       PIN25047.1 132 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 176
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDSEMGFLNP TSYSNWLFEE STVTKWTPEE NKKFENALAL FDKDTPDRWQ NVASMIPGKT  60
VSDVIKQYRE LVEDISDIEA GLIPIPGYSN NSFTLEWVSN NGYEGFKQLY SPSGKRNSAT  120
RCNDHERKKG VPWTEEEHRQ FLLGLKKYGK GDWRNISRNF VTTRTPTQVA SHAQKYFIRQ  180
LSGGKDKRRS SIHDITTVNL DETKSPSPDK DGPNSPDKSN LIVQNLDTDV VVRATYDSDH  240
LRNTGAMMGF SAPTGSLMIS QLQGTSSFGL NHMQSIDPHG LRLGHHGSMF QIRHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-108MYB family protein