PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24604.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 312aa MW: 34482 Da PI: 7.1243

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45	1.9e-14	119	170	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ PIN24604.1 119 QRMTHIAVERNRRRQMNDYLSILRSLMPPS---YAQRGDQASIVGGAINFVKELE 170 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MALETVIFQQ DPFIYGCKDY TSCNMGGGYG FGLQPSLHEQ KPNAENLDAV NGQQGSNRCW 60 DSPPSSGLAH NPASSPDTCG GAGDGFFSCG GYSPAVVAAS RRKRRRTKSM KNKEEMENQR 120 MTHIAVERNR RRQMNDYLSI LRSLMPPSYA QRGDQASIVG GAINFVKELE QLLQFLESHK 180 PSNFQQPNAA YSNLLSNFFT FPQYSTCLGG DAMDAAAERR SAIADIEVAM VETHANIKIL 240 TKRRPKQLLK MVAAFQSIYL TILHLKVTTV DQSVLYSFSV KVEDECQLST VNEIATSVHD 300 LVGMIQEESV CS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	106	RKRRR
2	102	107	RKRRRT
3	120	131	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-74	bHLH family protein