PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 380aa MW: 43015.2 Da PI: 7.9766 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171 | 3.8e-53 | 17 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 + pGfrFhPtdeelv +yL++k+++++l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t sg+Wkatg+d++++s+ +++ PIN24492.1 17 MLPGFRFHPTDEELVGFYLRRKLQQRSLPI-ELIKQVDIYKYDPWDLPKLAATGEKEWYFYCPRDRKYRNSTRPNRVTGSGFWKATGTDRPIYSSeGTK 114 579***************************.89***************8888899***************************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg+ktdW+mhe+rl PIN24492.1 115 CIGLKKSLVFYRGRAAKGVKTDWMMHEFRL 144 7***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MEEKINDGDK SAIDDIMLPG FRFHPTDEEL VGFYLRRKLQ QRSLPIELIK QVDIYKYDPW 60 DLPKLAATGE KEWYFYCPRD RKYRNSTRPN RVTGSGFWKA TGTDRPIYSS EGTKCIGLKK 120 SLVFYRGRAA KGVKTDWMMH EFRLPSTADG APAPPKKILD RNFPATDSWA ICRIFKKTTS 180 IAQRALSHSW TPPFSETSSP DPFTYTPKIT HFNSENEFQQ ANFSPLDIPS YKTTTAITGK 240 PPFLTSANAD NFNFPSNLVF SSPEEACNKN TVDLSSMLFN GCKNSDFEGP QQQFINGCSV 300 NSSLIMQGNV NGEDEQEGFR KNQSMTNLHT SWGNIRSMGF PFSLPSAETE SWNKTTLPWD 360 SPPCPSEISS TTYSTNKCYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39820.1 | 1e-100 | NAC family protein |