PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24473.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 614aa    MW: 69164.6 Da    PI: 4.765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.82.1e-53691961128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 l+pGfrFhPtdeelv +yL++kv gk++++ ++i+e+diyk+ePwdLp  +k+k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd+ v++ k+
  PIN24473.1  69 LAPGFRFHPTDEELVRYYLRRKVCGKSFHF-DAISEIDIYKAEPWDLPslSKLKTRDLEWYFFSVLDKKYGNGARTNRATEKGYWKTTGKDRGVYH-KT 165
                 579**************************9.99***************5448888888**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + vg+kktLv++ grapkg++t+Wvmheyrl
  PIN24473.1 166 QIVGMKKTLVYHIGRAPKGQRTNWVMHEYRL 196
                 9****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MYLTSLFVYF FYKSTLFNGN ALYPSQFTIQ PLTHLPKKPI VFKFHKIPHL ILWFVMESAK  60
GKKRSSGLLA PGFRFHPTDE ELVRYYLRRK VCGKSFHFDA ISEIDIYKAE PWDLPSLSKL  120
KTRDLEWYFF SVLDKKYGNG ARTNRATEKG YWKTTGKDRG VYHKTQIVGM KKTLVYHIGR  180
APKGQRTNWV MHEYRLTDLE LERAGIFQDA FVLCRVFQKS GSGPKNGEQY GAPFVEEEWE  240
EDELELVPKA EAAEEFDFGD DAYLDGHDLE QILGSDAPSD TSSLPVNFHT ADGSFGEEIV  300
ETVPDTQNLL LNADKQYCEP QQHEDKNLYD LPAPCDTDVR TVKHEYISES SKSGNSDVLD  360
YLLDEPFLDT STELPYGNGG FIEANDLSNP IETNSSPFDV LEYLTFFDAN DDNTQHFACD  420
PSVMLGNEEL KPDQALLPPE ELNDETKQST LPSGPLVDNN NNHDASPSDK LDSAKDESDY  480
PYPFAKQASH MLGSIPAPPA FAAEFPSKDA VLRLNSLSQP SSSVHFTAGM IQIRNLTMNQ  540
NGREESLGKP GILNIVLSFG FSRGDDGSAS LESSVRILPG KTFSSLSRGW FYFICFWVLI  600
LSMSFKMGTC ICAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-135NAC family protein