PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN24472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 395aa MW: 44235.5 Da PI: 4.9061 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.2 | 1.1e-51 | 24 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yL++k+ gk++++ ++++e+d+yk+ePw+L +++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd+ v + k+ PIN24472.1 24 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVTEIDVYKSEPWELAdySSLKSRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRGVRH-KD 120 579*************************99.88**************84347777888**************************************.89 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf++grap+g++t+Wvmheyrl PIN24472.1 121 QTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 151 99***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MGQEVVVAAV GTAAGVGAPP PTSLAPGFRF HPTDEELVRY YLRRKACGKP FRFQAVTEID 60 VYKSEPWELA DYSSLKSRDL EWYFFSPVDR KYGNGSRLNR ATGKGYWKAT GKDRGVRHKD 120 QTIGMKKTLV FHSGRAPDGK RTNWVMHEYR LCDSELERAG VSQDAFVLCR IFQKSGLGPP 180 NGDRYAPFVE EEWDEDAGLI VPGGDAEDDV ANGDEARVEC TDVDQETQQL TMAPPQIDNP 240 IGSNGLPFIC KRERSEEEPE PLSLAQAKRS KNDDPNSSHA NGSEDSTTTS QDPPTMTMTT 300 NFSSALLEFP LLQPLEPKEN HAVNPLTFDS SNLEKSVPPG YLKFISNLEN EILNVSMERE 360 TLKIEVMRAQ AMINILQSRI DILTKENEDL RRHHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10490.2 | 1e-96 | NAC family protein |