PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN24220.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 505aa MW: 55315.2 Da PI: 4.8954

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN24220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	321	363	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L PIN24220.1 321 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 363 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MLPRSSGVVW MDGQEDEVLS WPSRTHNEPD PSRDDEMNAS LSSFRSMLEN DCFMNNAINT 60 PNPLYHPEFS SLFFNPLDAS ACSSSQAFAL DPSQQLPSFL PPKSVLPSLF NNNFDNGFDL 120 SCDPTFFPAQ DSSPAPVLMG FNGLNNSQFQ PSSDFPASSR MLPFPDDNAA SAAIGGVSNA 180 FSFEGLDIGG IFPNRSKVLR PLEVLPPVGA QPTLFQKRAA LRQSSGLQNL GTISSRSDEA 240 LTSLDDTGGM EFGKKRKRTY EDEVEDMGAD ISTMNYDSDE LTEKLGEGNA DNGGDNSNAN 300 SSITGGDQRG KKKGMPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL 360 KELLQRINDL HNELEASPPG SLMHPTTSFH PLTPTPPTLP YRVKEELCAS STASPKNQPA 420 KVEVRLREGR AVNIHMFCAR RPGLLLSTMR ALDNLGLDIQ QAVISCFNGF ALDVFRAEQC 480 REGQDVLPEQ IKAVLLDSAG FHGVI

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MLPRSSGVVW MDGQEDEVLS WPSRTHNEPD PSRDDEMNAS LSSFRSMLEN DCFMNNAINT  60
PNPLYHPEFS SLFFNPLDAS ACSSSQAFAL DPSQQLPSFL PPKSVLPSLF NNNFDNGFDL  120
SCDPTFFPAQ DSSPAPVLMG FNGLNNSQFQ PSSDFPASSR MLPFPDDNAA SAAIGGVSNA  180
FSFEGLDIGG IFPNRSKVLR PLEVLPPVGA QPTLFQKRAA LRQSSGLQNL GTISSRSDEA  240
LTSLDDTGGM EFGKKRKRTY EDEVEDMGAD ISTMNYDSDE LTEKLGEGNA DNGGDNSNAN  300
SSITGGDQRG KKKGMPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL  360
KELLQRINDL HNELEASPPG SLMHPTTSFH PLTPTPPTLP YRVKEELCAS STASPKNQPA  420
KVEVRLREGR AVNIHMFCAR RPGLLLSTMR ALDNLGLDIQ QAVISCFNGF ALDVFRAEQC  480
REGQDVLPEQ IKAVLLDSAG FHGVI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	254	259	KKRKRT
2	311	329	KKKGMPAKNLMAERRRRKK
3	323	330	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-127	bHLH family protein