PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN24071.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family G2-like
Protein Properties Length: 266aa    MW: 30238.4 Da    PI: 7.5981
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN24071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.79.4e-322074155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+WtpeLH+rF++av +LGG++kAtPk+++++m+++gLtl+h+kSHLQkYRl
  PIN24071.1 20 KPRLKWTPELHQRFIDAVVKLGGAHKATPKSLMRIMGIHGLTLYHLKSHLQKYRL 74
                79****************************************************8 PP
2Myb_DNA-binding59.57.2e-192273148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT+e++++++dav +lGg    t+k+ +r mg  g+tl+++ks++qky+
       PIN24071.1 22 RLKWTPELHQRFIDAVVKLGGAhkaTPKSLMRIMGiHGLTLYHLKSHLQKYR 73
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MALQNVHRKE MNLVLSSDAK PRLKWTPELH QRFIDAVVKL GGAHKATPKS LMRIMGIHGL  60
TLYHLKSHLQ KYRLGRSQQL QMCHQNKQEE CGEKQRSHFN SKICDGEEEK INENLQINKA  120
LQMQMEVQRK LHEQIEVQKH LQLRIEAQRK YLQLVLKKAE ETLSLYNSCS IEVENAKAQL  180
SELLSTVDSG CQSPSFSVLT QSEGLAIMNE GERLLVHNGC SPESSITSSD GGSESKVHEN  240
EKVKRSRLLE NIDLNCEFTD VDSGPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.19e-69G2-like family protein