PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23987.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 336aa MW: 37871.6 Da PI: 4.8267

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	32.2	1.8e-10	264	315	3	54
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 R +++k q e+Le+++++++ p+ +++ + + ++L+ ++V WF +Ra PIN23987.1 264 ARKRLKKVQRETLEQVYRRTKRPTNAMISSIVHVTNLPRKRVVKWFEDKRAE 315 58999*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MASTTLRIST ALKCASSNKE PIFVGNPRGT LTNAFLPRQP ASRSAENATP SVTSKKLNKK 60 KTVHKNVGED EDIDEDAFEA LFRQLEEDLK NDELLGNDGV DDDISEEELA KLEQELAEAL 120 DEVHDEEDYA ACGETKNEDE EDDDEGHDEG GFEVDDEEEK PIKLKNWQLR RLAYALKNGR 180 RKTSIKNLAA DVCLDRAIVL KLLHDPPPNL VMMSATLPDK PVLPILDPVE KPAEAVPLET 240 LTSSAKQEVE AKVPVHVMQS NWSARKRLKK VQRETLEQVY RRTKRPTNAM ISSIVHVTNL 300 PRKRVVKWFE DKRAEEGVPE KRLPYQRSAP ESVFTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	272	ARKRLKKVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	3e-70	HB-other family protein