PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23870.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 302aa    MW: 32861.2 Da    PI: 6.8432
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.8e-16221257135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  PIN23870.1 221 CRHCGISEksTPMMRRGPEGPRTLCNACGLMWANKGT 257
                 *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDGMHSSEAG MMHYLQDQHH HGLHHHMGNG NAIDQDEHGD NNNIGSSSAV NEVMDGDVAP  60
DMGNQPDNHG ALIPHAAGSE NNNQLTLSFQ GQVYVFDSVS PEKVQAVLLL LGGREVPPNI  120
PAVPVSASNN RGLSSAPQKF NVPQRLASLI RFREKRKERN FDKKIRYTVR KEVALRMQRN  180
KGQFTSSKPN HDDSASAVSS WDSNQNWGSD GNGSQVQDIS CRHCGISEKS TPMMRRGPEG  240
PRTLCNACGL MWANKGTLRD LSKATTPLAN NPLRNRSDEN GNFEAEEMVL SAGGNGNGND  300
SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-100GATA family protein