PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23628.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 326aa    MW: 36150 Da    PI: 5.479
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19126176155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  PIN23628.1 126 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIQLRG 176
                 59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MMSGSNVKYT EHLNKTTVIC RPEYSLSGGE KLFPARMTTR TVRISVTDAD ATDSSSDEEG  60
HSSVKRQRVR KFINEVRIQP CCRDNGNGNV VFNGVSENRR PSVTVPKRRK SSGGKIKNAA  120
RMGNAKKFRG VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDHA AIQLRGPDAL  180
TNFSTAPEKD NKTSLGYNSA DESQNNVHSP KSVLRFTSPA DSQAEADADV ESSSIFSPSD  240
NENFSDFSIF PQSDDLFRGF EDPVPGLFDP AWFSDNIFGM DFEFCHDVLI GSSADLGSRF  300
GSSTWLSDDF FPDLGDIFGS DPLVAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-52ERF family protein