PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23476.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 697aa    MW: 78692.2 Da    PI: 6.9526
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.41.4e-192377256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                ++ +++++eq+e+Le++++++++p++++r++L+++lgL+ rq+k+WFqN+R+++k
  PIN23476.1 23 KQYHRHSTEQIERLESFYKECPNPDEAQRQQLSRELGLEPRQIKFWFQNKRTQKK 77
                677899*********************************************9987 PP
2START139.82.8e-442174333203
                 HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT CS
       START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg 88 
                 a +a++elv +   ++p+W  s+     ++ +d + + f++++       ++e +++s+ v m++ + v+ lld++ +W  +++    ka t+ev++sg
  PIN23476.1 217 AVAAMDELVELLRIKDPVWIVSPtdgrYMLHRDSYDKLFPKTNHfkstsVRVESSKDSAEVAMAAKQIVQMLLDSN-KWRDMFPnivtKARTIEVLDSG 314
                 7899*******************888878888888888877766999999**************************.********************** PP

                 ...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHHHH CS
       START  89 ...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwllr 182
                    g l+lm+ ++ +lsplv+ R++ f+Ry+rql+  +wv vdvS d  ++ + +++  R+ +lpSg++ie++sng+s++tw+ehv ++++l  h l+r
  PIN23476.1 315 nfgGSLHLMYEKMHVLSPLVApREYFFIRYCRQLSPSTWVMVDVSFDFIKQLQ-DAPPTRSWKLPSGCMIEDMSNGKSTITWIEHVQVDDKLStHRLYR 412
                 ********************99**************************99998.8999***********************************9***** PP

                 HHHHHHHHHHHHHHHHHTXXX CS
       START 183 slvksglaegaktwvatlqrq 203
                  lv s++a gak+w atlqr 
  PIN23476.1 413 DLVCSSQAYGAKRWIATLQRM 433
                 *******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MDLAHGGSGS GDEEASNSRK DQKQYHRHST EQIERLESFY KECPNPDEAQ RQQLSRELGL  60
EPRQIKFWFQ NKRTQKKVQN ERADSNALRS ENERLICENR AMQEALRNIT CPSCNGAGGG  120
KEGNQQNLQR LRMENIRLKE EHEKTINFVS NYVGKSTNTL GTESFSNMLG SNFPGDGIGT  180
TTPFDLRQIP HHLETPILPY HSFGINEMDK PTIVETAVAA MDELVELLRI KDPVWIVSPT  240
DGRYMLHRDS YDKLFPKTNH FKSTSVRVES SKDSAEVAMA AKQIVQMLLD SNKWRDMFPN  300
IVTKARTIEV LDSGNFGGSL HLMYEKMHVL SPLVAPREYF FIRYCRQLSP STWVMVDVSF  360
DFIKQLQDAP PTRSWKLPSG CMIEDMSNGK STITWIEHVQ VDDKLSTHRL YRDLVCSSQA  420
YGAKRWIATL QRMFERLAFS VGLNTATPKH ELEGVIDSLE GRRNLMRLSH RMIKNYFEVL  480
SMSDKHDFYH LSEMTNSGVR VSVRKSNGPG EPEGFIVNAA TSLWLPFSYE NLFNFLRDEK  540
KRAQWDVLAN GNPVKAIARI STGSDPRNCI SIVQPFVPEE NLLMLEESSI DSLGAIIVYV  600
PIHLPAITSA INGEDTTKIP ILPSGYVIST DGRTDKRIGT SSSSSTIGSL LTVAYQILVH  660
CGSTSKQLDM ESVATVHSLI SSTVQKMKVA LDYCESD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein