PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN23251.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 345aa MW: 38381.6 Da PI: 7.1423

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN23251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.7	5.7e-34	175	233	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCts+ C vkk+vers+edp++v++tYeg+H+h+ PIN23251.1 175 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSTACGVKKRVERSSEDPSIVVTTYEGTHTHP 233 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MEGKKKESTE RENSLKNTPF PDRMMIPETT SFSNPNSLFD ISCEQAINYD NQHQKSSSFG 60 FIDMLSVQDF STPSSIFEDL LPNITIPLAP PLHSPPSTVP EYSEVVNTPA TPNSSSMSSS 120 STEAAANDDH KKNEEEEEQD QQKTTKKQLK PKKKNPKRQR EPRFAFMTKS EIDHLDDGYR 180 WRKYGQKAVK NSPFPRSYYR CTSTACGVKK RVERSSEDPS IVVTTYEGTH THPCPITPRG 240 SFGIMPETTI GSGGGGGGIS SVGGGGGGGS TSHFLNIPPL FHHHEQLTPQ PYFHNLSNFR 300 TSTNPTFPQS YRERPFCPSA SSLARDHGLL QDMLPSQMLK DTKEE

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MEGKKKESTE RENSLKNTPF PDRMMIPETT SFSNPNSLFD ISCEQAINYD NQHQKSSSFG  60
FIDMLSVQDF STPSSIFEDL LPNITIPLAP PLHSPPSTVP EYSEVVNTPA TPNSSSMSSS  120
STEAAANDDH KKNEEEEEQD QQKTTKKQLK PKKKNPKRQR EPRFAFMTKS EIDHLDDGYR  180
WRKYGQKAVK NSPFPRSYYR CTSTACGVKK RVERSSEDPS IVVTTYEGTH THPCPITPRG  240
SFGIMPETTI GSGGGGGGIS SVGGGGGGGS TSHFLNIPPL FHHHEQLTPQ PYFHNLSNFR  300
TSTNPTFPQS YRERPFCPSA SSLARDHGLL QDMLPSQMLK DTKEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	1e-49	WRKY family protein