PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN23116.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 210aa    MW: 23739.7 Da    PI: 6.2814
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN23116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-203687256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +l+g+
  PIN23116.1 36 KYRGIRRRP-WGKFAAEIRDPNRNG--ARLWLGTFETAEEAARAYDRAAFALRGH 87
                8********.**********96665..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MRYCLAQVPK ELTCLAKKYQ TIYILMEAAK DSKELKYRGI RRRPWGKFAA EIRDPNRNGA  60
RLWLGTFETA EEAARAYDRA AFALRGHQAI LNFPNDSHYK NGLGWCRPVA PGISGVNTQA  120
GPSQLLNALP SDSAVVQEEE GRSEGPDGQI IQFEYLDNEL LEELLGTQFQ GHDNLQLRIN  180
PAFESRFIVF EVMRWDSAND GSNVTPKSQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.15e-23ERF family protein