PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN22970.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HSF

Protein Properties

Length: 394aa MW: 45940.7 Da PI: 6.1341

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN22970.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112	4.1e-35	63	155	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e+++d+e++++isws++ nsfv++d+++f++++Lpk+Fkh+nf+SFvRQLn+Y F+k+++++ weF++++F++gk +ll++ik PIN22970.1 63 FLRKTFEMVDDPETDSIISWSSSRNSFVIWDPHKFSTDLLPKHFKHNNFSSFVRQLNTYRFRKIDSDK---------WEFANEHFQQGKMHLLKHIK 150 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ PIN22970.1 151 RRKQN 155 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MALEMAENEL KMVKSEENGG KLMENGNSIG NGDEVLIKEE AFEWEEMHPK PIEGLKETGP 60 PPFLRKTFEM VDDPETDSII SWSSSRNSFV IWDPHKFSTD LLPKHFKHNN FSSFVRQLNT 120 YRFRKIDSDK WEFANEHFQQ GKMHLLKHIK RRKQNSQTMH QQLTTQSWLD PTKHRVESEL 180 ERLKTDQKAL QTEVINLRRQ QEVTQHYLAA VKERLHITET RQKHLTLFVF KYLNNPVFLQ 240 HFIETMKRKR ALTDGGILKK RRLMESKEAN ETTINTDEFA NGSIDDKRLQ VPEELTTSHS 300 EIQTLFSPDD SGSHLQEQRT ENSPEKNSLD SSSENFVLWE KLMEDDMIYE DDAAASKQQS 360 NIVSEFEDLI AKQSECGVRM RGLVKPVGFP AYIA

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MALEMAENEL KMVKSEENGG KLMENGNSIG NGDEVLIKEE AFEWEEMHPK PIEGLKETGP  60
PPFLRKTFEM VDDPETDSII SWSSSRNSFV IWDPHKFSTD LLPKHFKHNN FSSFVRQLNT  120
YRFRKIDSDK WEFANEHFQQ GKMHLLKHIK RRKQNSQTMH QQLTTQSWLD PTKHRVESEL  180
ERLKTDQKAL QTEVINLRRQ QEVTQHYLAA VKERLHITET RQKHLTLFVF KYLNNPVFLQ  240
HFIETMKRKR ALTDGGILKK RRLMESKEAN ETTINTDEFA NGSIDDKRLQ VPEELTTSHS  300
EIQTLFSPDD SGSHLQEQRT ENSPEKNSLD SSSENFVLWE KLMEDDMIYE DDAAASKQQS  360
NIVSEFEDLI AKQSECGVRM RGLVKPVGFP AYIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	152	LKHIKRR
2	247	262	KRKRALTDGGILKKRR
3	248	263	KRKRALTDGGILKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	5e-71	HSF family protein