PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 210aa MW: 25005 Da PI: 6.5383 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59 | 7.6e-19 | 25 | 76 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++eq++ Le+ F+ ++++ +++ +LA++lgL+ rqV +WFqN+Ra++k PIN22932.1 25 RRFSDEQIKSLESIFKVENKLEPRKKLQLARELGLQPRQVAIWFQNKRARWK 76 68*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.6 | 6.7e-38 | 24 | 114 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 rr+s+eq+k+LE+ F+ e+kLep++K +lareLglqprqva+WFqn+RAR+k+kqlE++y+ L+++y+ l + + L++e ++L+ el++ PIN22932.1 24 ARRFSDEQIKSLESIFKVENKLEPRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLEQEYRILRENYEDLYMKFDDLKRERQSLQMELQK 114 69************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MESPTKQSPQ KIDEKQSKNK AKNARRFSDE QIKSLESIFK VENKLEPRKK LQLARELGLQ 60 PRQVAIWFQN KRARWKSKQL EQEYRILREN YEDLYMKFDD LKRERQSLQM ELQKLSDLEK 120 NLHNANLIDQ NSKFEEYPKI SHEEMDHNYV IRAENEQKIT NCFEKTQEQE VLSWGEQEGE 180 ISHLASPENW CNFPSGGLLS GSSSWWGVNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 7e-44 | HD-ZIP family protein |