PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN22627.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 339aa MW: 38266.1 Da PI: 9.2704 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.2 | 1.3e-52 | 16 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v+yL+kkv+g++++l ++i ++d+yk++PwdLp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +g++ PIN22627.1 16 LPPGFRFYPTDEELLVQYLCKKVAGHHFSL-QIIGDIDLYKFDPWDLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT-EGRK 112 79***************************9.89***************7777799***********************************9999.999* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkg+kt+W+mheyrl PIN22627.1 113 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 141 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MKMGIRETDP LSQLSLPPGF RFYPTDEELL VQYLCKKVAG HHFSLQIIGD IDLYKFDPWD 60 LPSKAIFGEK EWYFFSPRDR KYPNGSRPNR VAGSGYWKAT GTDKIITTEG RKVGIKKALV 120 FYVGKAPKGT KTNWIMHEYR LSEPSRKNGS VRLDDWVLCR IYKKNSSAQK PTISGVQSKE 180 YSLGSSSSSS SQYDDVLESL PEIDDRFFSL PRMNSLKNIK QEDQKLNLQQ LGSGNFDWAT 240 LAGLHPLPEL GPPQPGLTQQ PQMNNNNMNG QNDIYAPSLQ HLGGNVMDEE VQSGLRAQRG 300 DRPGFFPQNV GMYSHDFSNS IDPFSVRYPT QPGGLGFRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-129 | NAC family protein |