PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22422.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 852aa    MW: 93140.4 Da    PI: 6.4588
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.31.3e-182583357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  PIN22422.1 25 KYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECpilaNIEPKQIKVWFQNRRCREKQ 83
                6789*****************************************************97 PP
2START169.32.6e-531733812205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e++ ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d++ W ++++ +++   i sg  g+++l+++++
  PIN22422.1 173 IAEETLTEFLGKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRLSWYRDCRFVDIASIIPSGngGTIELIYMQT 270
                 6899******************************************************.8999999999****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +al++l++ Rdf+++Ry+ +l++g++vi+++S++s +   +      +vRae+lpSg+li+p+++g+s v++v+h+dl++++++++lr+l++s+ + ++
  PIN22422.1 271 YALTTLASaRDFWTLRYTTSLEDGSLVICERSLTSSTGGASgppATCFVRAEMLPSGCLIRPCEGGGSIVHIVDHIDLDAWSVPEVLRPLYESSKILAQ 369
                 ***********************************988766665899**************************************************** PP

                 HHHHHHTXXXXX CS
       START 194 ktwvatlqrqce 205
                 k+++a+l++ ++
  PIN22422.1 370 KMTMAALRHVRQ 381
                 *******98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    
MALSMHRESN SSGSNGKMSQ MDASKYVRYT PEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILANIEPKQI KVWFQNRRCR EKQRKESSRL QTVNRKLTAM NKLLMEENDR LQKQVSHLVY  120
ENGFMRQQLN TVSSTTTDTS CESVVMSGQQ QQQNPTPQHP QRDANSPAGL LAIAEETLTE  180
FLGKATGTAV DWVQMIGMKP GPDSIGIVAV SRNCSGVAAR ACGLVSLEPT KVAEILKDRL  240
SWYRDCRFVD IASIIPSGNG GTIELIYMQT YALTTLASAR DFWTLRYTTS LEDGSLVICE  300
RSLTSSTGGA SGPPATCFVR AEMLPSGCLI RPCEGGGSIV HIVDHIDLDA WSVPEVLRPL  360
YESSKILAQK MTMAALRHVR QIAQETNGEI QCSGGRQPAV LRVLSQRLCR GFNDAVNGFV  420
DDGWSIMSSD GAEDVTIAIN SSPSKFLGSH HNSLSMLPTF GGVLCARASM LLQNVPPALL  480
VRFLREHRSE WADYGVDVYS AASLKASPYA VPCAKPCGFP SSQVILPLAQ TVEHEESLEV  540
VRLEGHAFSP EDIALSRDMY LLQLCSGIDE TNTGACAQLV FAPIDESFGD DAPILPSGFR  600
VIPLDPKPDG PAATRTLDLA SALEVGRGGA RSAGEVDAAN QNLRSVLTIA FQFTFENHYR  660
DSVAAMARQY IRSIVASVQR VAMAIAPSRP SSHMVPKPLP GSPEAATLAH WICRSYRVFT  720
GGGLFQADSQ AGDAVLKQLW HHSDAIMCCS VKMNASAVFT FANQAGLDMM ETTLVALQDI  780
MLDKILDEAG RKILLSEFSK IMQQGYAYLP AGVCVSSMGR PVSYEQAIAW KVLNDDDSNH  840
CLALMFMNWS FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein