PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN22001.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 829aa    MW: 90279.8 Da    PI: 6.1526
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN22001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.7e-21133188156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  PIN22001.1 133 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 188
                 688999***********************************************999 PP
2START201.43.7e-633395631206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela++a++elvk+a+ +ep+W +      e++n +e+l++f++  +       +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t++vis
  PIN22001.1 339 ELALAAMDELVKMAQTDEPLWLRNLeggrEILNHEEYLRTFTPCIGmkpngLVTEASRETGMVIINSLALVETLMDSN-KWAEMFPciiaRTSTTDVIS 436
                 5899**************************************99989*******************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                  g      galqlm+a+lq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  +++p  + +  +++lpSg+++++++ng+skv wveh++++++++h
  PIN22001.1 437 VGmggtrnGALQLMNAALQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRENPAGPTFPNCRRLPSGCVVQDMPNGYSKVMWVEHIEYDESVVH 535
                 *************************************************************************************************** PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 + +r+l++ g+ +ga++wvatlqrqce+
  PIN22001.1 536 QHYRPLISAGMGFGAQRWVATLQRQCEC 563
                 **************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
MNFGDFLDNN SCGGGGARIV GDIPYSNSNN STAITTTQSS NINSMPAGAI AQPRLVSQSL  60
TTKPMFNSPG LSLALQTGME GQGEMARMGE NYELGNVGGR RSRDEEHESR SGSDNLEGAS  120
GDDQDAADKP PRKKRYHRHT PQQIQELEAL FKECPHPDEK QRLELSKRLC LETRQVKFWF  180
QNRRTQMKTQ LERHENAMLR QENDKLRAEN MSIREAMRNP ICTNCGGPAI IGEISLEEQH  240
LRIENARLKD ELDRVCVLAG KFLGRPISSL AASMGASMPN SSLELGVGSN GFAGLNPVPS  300
TLPLVPNDFG VGISSPLPVV PPKAPMNITQ SFERSMYLEL ALAAMDELVK MAQTDEPLWL  360
RNLEGGREIL NHEEYLRTFT PCIGMKPNGL VTEASRETGM VIINSLALVE TLMDSNKWAE  420
MFPCIIARTS TTDVISVGMG GTRNGALQLM NAALQVLSPL VPVREVNFLR FCKQHAEGVW  480
AVVDVSIDTI RENPAGPTFP NCRRLPSGCV VQDMPNGYSK VMWVEHIEYD ESVVHQHYRP  540
LISAGMGFGA QRWVATLQRQ CECLAILMSS TVPARDHTAI TSAGRRSMLK LAQRMTNNFC  600
AGVCASSVHK WNKLSTENVD EDVQVMTRKS IDDPGEPPGI VLSAATSVWL PVSPQRLFDF  660
LRDEHLRSEW DILSNGGPMQ EMAHIAKGQD HGNCVSLLRA SAINSNQSSM LILQETCIDA  720
AGSLVVYAPV DIPAMHVVMN GGDSAYVALL PSGFAIVPDG PGSRGPTSNG PTINGGPGHR  780
VSGSLLTVAF QILVNSLPTA KLTVESVETV NNLISCTVQK IKAALQCES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein