PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21942.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 434aa    MW: 49365.1 Da    PI: 4.3246
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.65.8e-08248295347
                      SS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++++++++++v    + +G + Wk   + ++ +Rt k+++s+++++
       PIN21942.1 248 KWTPDDEQIFLEVVlsnpASHGRKFWKHLREAFP-TRTKKELVSYYFNV 295
                      7*************4444456666**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MGIKRPLEEE DPEPSFHQPK QPDCNKKLAI CTEESYITTA GVDSPGGAKG TSCKLQFDGR  60
LEDGERDGAS IGDKELEASA PLSLVTSSSS EEDAGNRDTS LRSYFPEYID YSLPMPLPEQ  120
FEDPYIYLLN SSPRKEVPIG PDHQAEVPLW NPNVGWEDFS NSNFLADNNR DQKLLGTCII  180
PMPDFNDSNI DGVRAGRGRT DCSCLDVGSM RCVQQHVKEV RERLRETVGD EKFKELGFCD  240
MGDEVACKWT PDDEQIFLEV VLSNPASHGR KFWKHLREAF PTRTKKELVS YYFNVFMLHR  300
RAVQNRSYME IDSDNDEERR SAHGDFHQNG SYSFDLDTDH DDERQVPNRE CYLIGGDDED  360
STVESFGDQE LDASWVDNFW SEPENIPMDD GSNRKHGNPE RKVEKQNDIK IDDKTEETAG  420
QETKKLDNDR IFGS