PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN21494.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family E2F/DP
Protein Properties Length: 354aa    MW: 38750.2 Da    PI: 6.7269
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN21494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP862.9e-27101183271
     E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  PIN21494.1 101 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpnnnlaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIHWKG 183
                 689********...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MVNHSNDNSI SNREDGNKNS SIISKGCGGM VTTVSGQSMS TSGSGGSPSS RSEAATATPA  60
SDSTFIRLNN PDFQGDDAGS QGPAGNRKKK RGQRAVGGDK SGRGLRQFSM KVCEKVESKG  120
RTTYNEVADE LVAEFADPNN NLASPDQQQY DEKNIRRRVY DALNVLMAMD IISKDKKEIH  180
WKGLPRTSLN DIEELKTERL GLRSRIEKKA AYLEELEEQY IGLQNLIQRN EQIYGPGNAP  240
SGGVALPFIL VQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDNYVLKA MKFCGKTQVD  300
GAMQNIPADG GESSSMADVY QPQIPHPSRS NILGRTPSSP SLPGILKARV KHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-138E2F/DP family protein